Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | C9Z39_08345 | Not Available | Positive | 1751293 - 1753065 | 65917.2 |
| dihydroneopterin triphosphate diphosphatase | C9Z39_08350 | Not Available | Positive | 1753183 - 1753635 | 17306.7 |
| yebc/pmpr family dna-binding transcriptional regulator | C9Z39_08355 | Not Available | Positive | 1753664 - 1754404 | 26424.0 |
| crossover junction endodeoxyribonuclease ruvc | C9Z39_08360 | Not Available | Positive | 1754439 - 1754960 | 18747.9 |
| yebb family permuted papain-like enzyme | C9Z39_08365 | Not Available | Negative | 1754962 - 1755564 | 22705.2 |
| hypothetical protein | C9Z39_08370 | Not Available | Positive | 1755635 - 1755700 | 2665.42 |
| holliday junction branch migration protein ruva | C9Z39_08375 | Not Available | Positive | 1755839 - 1756450 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | C9Z39_08380 | Not Available | Positive | 1756459 - 1757469 | 37176.0 |
| zinc uptake system membrane protein znub | C9Z39_08385 | Not Available | Negative | 1757616 - 1758401 | 27730.4 |
| mn2+/zn2+abc transporter atp-binding protein | C9Z39_08390 | Not Available | Negative | 1758398 - 1759153 | 27869.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





