Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | C9Z39_07415 | Not Available | Negative | 1582969 - 1583592 | 23402.7 |
| siderophore-interacting protein | C9Z39_07420 | Not Available | Positive | 1583880 - 1584644 | 28873.1 |
| Trna-met | Not Available | Not Available | Positive | 1584698 - 1584773 | Not Available |
| g/u mismatch-specific dna glycosylase | C9Z39_07430 | Not Available | Positive | 1584898 - 1585404 | 18674.5 |
| rna polymerase sigma factor rpod | C9Z39_07435 | Not Available | Negative | 1585483 - 1587324 | 70241.3 |
| dna primase | C9Z39_07440 | Not Available | Negative | 1587519 - 1589264 | 65568.5 |
| 30s ribosomal protein s21 | C9Z39_07445 | Not Available | Negative | 1589375 - 1589590 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C9Z39_07450 | Not Available | Positive | 1589828 - 1590841 | 36010.5 |
| l-tartrate/succinate antiporter | C9Z39_07455 | Not Available | Negative | 1590884 - 1592347 | 52909.5 |
| l(+)-tartrate dehydratase subunit beta | C9Z39_07460 | Not Available | Negative | 1592395 - 1593000 | 22680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





