Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine/imine deaminase | C9Z39_07215 | Not Available | Positive | 1540417 - 1540806 | 14008.0 |
| l-serine dehydratase tdcg | C9Z39_07220 | Not Available | Positive | 1540878 - 1542242 | 48524.6 |
| transporter | C9Z39_07225 | Not Available | Positive | 1542517 - 1543848 | 48299.6 |
| serine dehydratase subunit alpha family protein | C9Z39_07230 | Not Available | Positive | 1543876 - 1545186 | 45363.8 |
| hypothetical protein | C9Z39_07235 | Not Available | Negative | 1545320 - 1545475 | 5651.76 |
| pirin-like protein yhak | C9Z39_07240 | Not Available | Negative | 1545495 - 1546196 | 25897.0 |
| lysr family transcriptional regulator | C9Z39_07245 | Not Available | Positive | 1546301 - 1547197 | 33258.3 |
| duf805 domain-containing protein | C9Z39_07250 | Not Available | Negative | 1547248 - 1547604 | 13456.7 |
| duf805 domain-containing protein | C9Z39_07255 | Not Available | Negative | 1547846 - 1548211 | 14281.7 |
| glutathione s-transferase family protein | C9Z39_07260 | Not Available | Negative | 1548550 - 1549491 | 35579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





