Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-independent periplasmic protein-refolding chaperone | C9Z39_06755 | Not Available | Negative | 1449154 - 1449639 | 18200.1 |
| succinylglutamate desuccinylase | C9Z39_06760 | Not Available | Negative | 1449969 - 1450937 | 35802.3 |
| n-succinylarginine dihydrolase | C9Z39_06765 | Not Available | Negative | 1450930 - 1452273 | 49301.4 |
| succinylglutamate-semialdehyde dehydrogenase | C9Z39_06770 | Not Available | Negative | 1452270 - 1453748 | 53029.3 |
| arginine n-succinyltransferase | C9Z39_06775 | Not Available | Negative | 1453745 - 1454779 | 38443.9 |
| succinylornithine aminotransferase | C9Z39_06780 | Not Available | Negative | 1454776 - 1455996 | 43667.8 |
| exodeoxyribonuclease iii | C9Z39_06785 | Not Available | Positive | 1456442 - 1457248 | 30970.9 |
| tvp38/tmem64 family membrane protein ydjx | C9Z39_06790 | Not Available | Positive | 1457415 - 1458125 | 26059.7 |
| protein ydjy | C9Z39_06795 | Not Available | Positive | 1458130 - 1458807 | 24126.6 |
| tvp38/tmem64 family protein | C9Z39_06800 | Not Available | Positive | 1458822 - 1459529 | 26161.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





