Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | C9Z39_06595 | Not Available | Negative | 1419267 - 1419566 | 11354.6 |
| phenylalanine--trna ligase subunit beta | C9Z39_06600 | Not Available | Negative | 1419571 - 1421958 | 87383.2 |
| phenylalanine--trna ligase subunit alpha | C9Z39_06605 | Not Available | Negative | 1421973 - 1422956 | 36833.9 |
| phenylalanyl--trna ligase operon leader peptide | C9Z39_06610 | Not Available | Negative | 1423240 - 1423284 | 1762.13 |
| 50s ribosomal protein l20 | C9Z39_06615 | Not Available | Negative | 1423407 - 1423763 | 13497.7 |
| 50s ribosomal protein l35 | C9Z39_06620 | Not Available | Negative | 1423816 - 1424013 | 7289.38 |
| translation initiation factor if-3 | C9Z39_06625 | Not Available | Negative | 1424110 - 1424652 | 20565.2 |
| threonine--trna ligase | C9Z39_06630 | Not Available | Negative | 1424656 - 1426584 | 74018.4 |
| hypothetical protein | C9Z39_06640 | Not Available | Positive | 1429179 - 1429286 | 4115.44 |
| duf481 domain-containing protein | C9Z39_06645 | Not Available | Negative | 1429339 - 1430097 | 27608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





