Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide antibiotic transporter sbma | C9Z39_05620 | Not Available | Negative | 1211544 - 1212764 | 46461.9 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | C9Z39_05625 | Not Available | Positive | 1213116 - 1214273 | 41851.5 |
| hydrogen peroxide resistance inhibitor ipra | C9Z39_05630 | Not Available | Negative | 1214274 - 1214897 | 23957.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9Z39_05635 | Not Available | Negative | 1214985 - 1217891 | 104730.0 |
| porphobilinogen synthase | C9Z39_05640 | Not Available | Positive | 1218415 - 1219389 | 35626.8 |
| taurine dioxygenase | C9Z39_05645 | Not Available | Negative | 1219496 - 1220347 | 32411.2 |
| taurine abc transporter permease tauc | C9Z39_05650 | Not Available | Negative | 1220344 - 1221171 | 29813.8 |
| taurine abc transporter atp-binding subunit | C9Z39_05655 | Not Available | Negative | 1221168 - 1221935 | 28346.6 |
| taurine-binding periplasmic protein | C9Z39_05660 | Not Available | Negative | 1221948 - 1222910 | 34267.9 |
| pig-l family deacetylase | C9Z39_05665 | Not Available | Positive | 1223526 - 1224197 | 25041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





