Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9Z39_05010 | Not Available | Positive | 1085905 - 1087101 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | C9Z39_05015 | Not Available | Positive | 1087290 - 1088048 | 28314.5 |
| phosphatidate cytidylyltransferase | C9Z39_05020 | Not Available | Positive | 1088061 - 1088918 | 31455.6 |
| sigma e protease regulator rsep | C9Z39_05025 | Not Available | Positive | 1088930 - 1090282 | 49074.2 |
| outer membrane protein assembly factor bama | C9Z39_05030 | Not Available | Positive | 1090312 - 1092744 | 90557.5 |
| chaperone protein skp | C9Z39_05035 | Not Available | Positive | 1092866 - 1093351 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9Z39_05040 | Not Available | Positive | 1093355 - 1094380 | 36040.7 |
| 3-hydroxyacyl-acp dehydratase fabz | C9Z39_05045 | Not Available | Positive | 1094485 - 1094940 | 17034.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | C9Z39_05050 | Not Available | Positive | 1094944 - 1095732 | 28081.7 |
| lipid-a-disaccharide synthase | C9Z39_05055 | Not Available | Positive | 1095732 - 1096880 | 42384.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





