Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0089 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1264594 bp
Thymine Count
1269300 bp
Guanine Count
1281235 bp
Cytosine Count
1297172 bp
Genome Length
5122166 bp
Protein-coding Genes
4648 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | C9Z39_04395 | Not Available | Negative | 945204 - 946193 | 35115.9 |
| chaperone sura | C9Z39_04400 | Not Available | Negative | 946193 - 947479 | 47286.5 |
| lps-assembly protein lptd | C9Z39_04405 | Not Available | Negative | 947532 - 949886 | 89675.8 |
| co-chaperone djla | C9Z39_04410 | Not Available | Positive | 950141 - 950956 | 30581.2 |
| hypothetical protein | C9Z39_04420 | Not Available | Positive | 951773 - 952057 | 9888.69 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9Z39_04430 | Not Available | Negative | 952465 - 953124 | 24862.1 |
| rna polymerase-associated protein rapa | C9Z39_04435 | Not Available | Negative | 953136 - 956042 | 109775.0 |
| dna polymerase ii | C9Z39_04440 | Not Available | Negative | 956207 - 958558 | 90057.6 |
| l-ribulose-5-phosphate 4-epimerase | C9Z39_04445 | Not Available | Negative | 958633 - 959328 | 25520.3 |
| l-arabinose isomerase | C9Z39_04450 | Not Available | Negative | 959528 - 961030 | 56076.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





