Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein espo | C9Z37_23280 | Not Available | Positive | 4758974 - 4759252 | 10353.2 |
| effector protein nlef | C9Z37_23290 | Not Available | Negative | 4760420 - 4760989 | 21389.2 |
| t3ss effector protein nleh | C9Z37_23295 | Not Available | Negative | 4761055 - 4761966 | 33684.6 |
| hypothetical protein | C9Z37_23300 | Not Available | Negative | 4762073 - 4762195 | 4556.71 |
| hypothetical protein | C9Z37_23310 | Not Available | Negative | 4763336 - 4763524 | 7245.69 |
| type iii secretion system effector nlea | C9Z37_23315 | Not Available | Positive | 4763791 - 4765116 | 47649.2 |
| duf1076 domain-containing protein | C9Z37_23320 | Not Available | Negative | 4765455 - 4765997 | 19589.0 |
| Trna-met | Not Available | Not Available | Positive | 4766148 - 4766224 | Not Available |
| type vi secretion system contractile sheath small subunit | C9Z37_23330 | Not Available | Positive | 4766858 - 4767358 | 18656.3 |
| type vi secretion system contractile sheath large subunit | C9Z37_23335 | Not Available | Positive | 4767417 - 4768955 | 58020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





