Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2726 domain-containing protein | C9Z37_22325 | Not Available | Negative | 4590756 - 4592924 | 82216.6 |
| dna helicase uvrd | C9Z37_22340 | Not Available | Negative | 4594928 - 4596673 | 65996.1 |
| ail/lom family protein | C9Z37_22345 | Not Available | Negative | 4596851 - 4597399 | 20318.5 |
| hypothetical protein | C9Z37_22365 | Not Available | Negative | 4600101 - 4600295 | 7755.58 |
| shet2/espl2 family type iii secretion system effector toxin | C9Z37_22370 | Not Available | Positive | 4600376 - 4602025 | 62133.1 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9Z37_22380 | Not Available | Positive | 4602634 - 4603623 | 37629.6 |
| t3ss effector protein nlee | C9Z37_22385 | Not Available | Positive | 4603672 - 4604346 | 26059.2 |
| hypothetical protein | C9Z37_22395 | Not Available | Positive | 4606220 - 4607686 | 56832.6 |
| hnh endonuclease | C9Z37_22400 | Not Available | Positive | 4607687 - 4608510 | 31329.2 |
| restriction endonuclease | C9Z37_22405 | Not Available | Positive | 4608680 - 4610755 | 79613.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





