Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | C9Z37_21705 | Not Available | Negative | 4490044 - 4490862 | 29465.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C9Z37_21710 | Not Available | Negative | 4490867 - 4491439 | 20641.7 |
| hypothetical protein | C9Z37_21715 | Not Available | Negative | 4491444 - 4491986 | 19845.9 |
| duf494 domain-containing protein | C9Z37_21720 | Not Available | Negative | 4492015 - 4492488 | 18497.2 |
| dna-protecting protein dpra | C9Z37_21725 | Not Available | Negative | 4492460 - 4493584 | 41009.3 |
| peptide deformylase | C9Z37_21730 | Not Available | Positive | 4493714 - 4494223 | 19329.6 |
| methionyl-trna formyltransferase | C9Z37_21735 | Not Available | Positive | 4494238 - 4495185 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | C9Z37_21740 | Not Available | Positive | 4495231 - 4496520 | 48352.2 |
| trk system potassium uptake protein trka | C9Z37_21745 | Not Available | Positive | 4496542 - 4497918 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | C9Z37_21750 | Not Available | Positive | 4498048 - 4498458 | 14927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





