Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee atpase escn | C9Z37_21450 | Not Available | Positive | 4444410 - 4445750 | 48868.2 |
| type iii secretion protein | C9Z37_21455 | Not Available | Positive | 4445810 - 4446130 | 12362.7 |
| duf1106 domain-containing protein | C9Z37_21460 | Not Available | Positive | 4446123 - 4446539 | 16348.6 |
| type iii secretion system protein sepq | C9Z37_21465 | Not Available | Positive | 4446502 - 4447419 | 34971.9 |
| secretion protein esph | C9Z37_21470 | Not Available | Positive | 4447450 - 4447965 | 19522.2 |
| tir chaperone family protein | C9Z37_21475 | Not Available | Negative | 4448184 - 4448543 | 13809.5 |
| t3ss effector protein map | C9Z37_21480 | Not Available | Positive | 4448794 - 4449405 | 22601.1 |
| type iii secretion system lee translocated intimin receptor tir | C9Z37_21485 | Not Available | Positive | 4449852 - 4451468 | 55484.1 |
| type iii secretion system lee chaperone cest | C9Z37_21490 | Not Available | Positive | 4451601 - 4452071 | 17721.9 |
| intimin type epsilon | C9Z37_21495 | Not Available | Positive | 4452132 - 4454978 | 103316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





