Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase | C9Z37_21200 | Not Available | Positive | 4403796 - 4405064 | 46053.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9Z37_21205 | Not Available | Positive | 4405087 - 4406535 | 51757.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9Z37_21210 | Not Available | Positive | 4406549 - 4407829 | 45749.3 |
| gaba permease | C9Z37_21215 | Not Available | Positive | 4408067 - 4409467 | 51083.1 |
| transcriptional regulator | C9Z37_21220 | Not Available | Positive | 4409488 - 4410150 | 24992.3 |
| peptidoglycan-binding protein lysm | C9Z37_21225 | Not Available | Negative | 4410151 - 4410600 | 16036.9 |
| yqae/pmp3 family membrane protein | C9Z37_21230 | Not Available | Negative | 4410684 - 4410842 | 5865.57 |
| transcriptional regulator | C9Z37_21235 | Not Available | Positive | 4411025 - 4411324 | 10596.9 |
| thiosulfate sulfurtransferase ygap | C9Z37_21240 | Not Available | Positive | 4411334 - 4411858 | 18743.0 |
| dna-binding protein stpa | C9Z37_21245 | Not Available | Negative | 4411905 - 4412309 | 15348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





