Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0087 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1364238 bp
Thymine Count
1366477 bp
Guanine Count
1376973 bp
Cytosine Count
1362009 bp
Genome Length
5487031 bp
Protein-coding Genes
5143 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | C9Z37_04720 | Not Available | Positive | 986072 - 987919 | 66636.3 |
| protein translocase subunit secf | C9Z37_04725 | Not Available | Positive | 987930 - 988901 | 35384.6 |
| hnh nuclease family protein | C9Z37_04730 | Not Available | Positive | 989030 - 989377 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C9Z37_04735 | Not Available | Negative | 989554 - 990438 | 33590.6 |
| duf3251 domain-containing protein | C9Z37_04740 | Not Available | Negative | 990737 - 991276 | 19561.6 |
| transcriptional regulator nrdr | C9Z37_04745 | Not Available | Positive | 991427 - 991876 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9Z37_04750 | Not Available | Positive | 991880 - 992983 | 40433.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9Z37_04755 | Not Available | Positive | 993072 - 993542 | 16157.4 |
| transcription antitermination factor nusb | C9Z37_04760 | Not Available | Positive | 993562 - 993981 | 15689.9 |
| thiamine-phosphate kinase | C9Z37_04765 | Not Available | Positive | 994059 - 995036 | 35106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





