Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222231 bp
Thymine Count
1214913 bp
Guanine Count
1247590 bp
Cytosine Count
1260839 bp
Genome Length
4953373 bp
Protein-coding Genes
4531 genes
Non-Coding Genes
272 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | C9Z36_09030 | Not Available | Negative | 1887752 - 1888213 | 17950.5 |
| rhs repeat protein | C9Z36_09035 | Not Available | Negative | 1888225 - 1889163 | 35132.4 |
| lyase | C9Z36_09040 | Not Available | Negative | 1889211 - 1890053 | 31906.4 |
| protein yhhh | C9Z36_09045 | Not Available | Negative | 1890158 - 1890541 | 14531.6 |
| duf4329 domain-containing protein | C9Z36_09050 | Not Available | Negative | 1890513 - 1891295 | 28888.5 |
| protein yohp | C9Z36_09055 | Not Available | Negative | 1891447 - 1891530 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | C9Z36_09060 | Not Available | Positive | 1891664 - 1893190 | 55638.3 |
| sdr family oxidoreductase | C9Z36_09065 | Not Available | Positive | 1893243 - 1894004 | 27001.5 |
| deda family protein | C9Z36_09070 | Not Available | Negative | 1894134 - 1894712 | 21445.9 |
| yip1 family protein | C9Z36_09075 | Not Available | Positive | 1894882 - 1895469 | 21692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





