Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222231 bp
Thymine Count
1214913 bp
Guanine Count
1247590 bp
Cytosine Count
1260839 bp
Genome Length
4953373 bp
Protein-coding Genes
4531 genes
Non-Coding Genes
272 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter yfdv | C9Z36_03895 | Not Available | Negative | 816197 - 817141 | 33569.9 |
| oxalyl-coa decarboxylase | C9Z36_03900 | Not Available | Negative | 817211 - 818905 | 60614.9 |
| formyl-coa--oxalate coa-transferase | C9Z36_03905 | Not Available | Negative | 818959 - 820209 | 45830.7 |
| yfdx family protein | C9Z36_03910 | Not Available | Negative | 820722 - 821354 | 22907.4 |
| lipoprotein | C9Z36_03915 | Not Available | Positive | 821650 - 821925 | 10210.5 |
| duf2545 family protein | C9Z36_03920 | Not Available | Negative | 822002 - 822244 | 8923.5 |
| lipid a biosynthesis palmitoleoyltransferase | C9Z36_03925 | Not Available | Positive | 822597 - 823517 | 35495.5 |
| membrane protein ypdk | C9Z36_03930 | Not Available | Positive | 823873 - 823944 | 2704.57 |
| alanine transaminase | C9Z36_03935 | Not Available | Negative | 824009 - 825247 | 46199.8 |
| sensor histidine kinase | C9Z36_03940 | Not Available | Positive | 825624 - 827321 | 62661.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





