Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1274467 bp
Thymine Count
1275855 bp
Guanine Count
1301432 bp
Cytosine Count
1296278 bp
Genome Length
5159557 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soxr-reducing system protein rsec | C9Z30_03355 | Not Available | Negative | 646215 - 646694 | 16640.3 |
| sigma-e factor regulatory protein rseb | C9Z30_03360 | Not Available | Negative | 646691 - 647647 | 35751.8 |
| anti-sigma-e factor rsea | C9Z30_03365 | Not Available | Negative | 647647 - 648297 | 24322.8 |
| rna polymerase sigma factor rpoe | C9Z30_03370 | Not Available | Negative | 648330 - 648905 | 21711.0 |
| rpoe leader peptide rsed | C9Z30_03375 | Not Available | Negative | 648902 - 649057 | 6229.83 |
| l-aspartate oxidase | C9Z30_03380 | Not Available | Positive | 649313 - 650935 | 60206.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9Z30_03385 | Not Available | Negative | 650920 - 651657 | 27209.4 |
| atp-dependent rna helicase srmb | C9Z30_03390 | Not Available | Positive | 651789 - 653123 | 49901.0 |
| hypothetical protein | C9Z30_03395 | Not Available | Positive | 653243 - 653359 | 4011.57 |
| short-chain fatty acid transporter | C9Z30_03400 | Not Available | Positive | 653424 - 656777 | 113614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





