Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1274467 bp
Thymine Count
1275855 bp
Guanine Count
1301432 bp
Cytosine Count
1296278 bp
Genome Length
5159557 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2554 family protein | C9Z30_22935 | Not Available | Positive | 4610580 - 4610810 | 8709.32 |
| u32 family peptidase | C9Z30_22940 | Not Available | Negative | 4610902 - 4612863 | 72736.0 |
| xre family transcriptional regulator | C9Z30_22945 | Not Available | Negative | 4612936 - 4613472 | 19732.4 |
| benzoate transporter bene | C9Z30_22950 | Not Available | Positive | 4613525 - 4614739 | 42147.8 |
| hcp family type vi secretion system effector | C9Z30_22955 | Not Available | Negative | 4615169 - 4615687 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C9Z30_22960 | Not Available | Positive | 4616384 - 4616884 | 18047.5 |
| hypothetical protein | C9Z30_22965 | Not Available | Positive | 4616919 - 4617143 | 8411.01 |
| type vi secretion system contractile sheath large subunit | C9Z30_22970 | Not Available | Positive | 4617194 - 4618669 | 55705.0 |
| type vi secretion system baseplate subunit tsse | C9Z30_22975 | Not Available | Positive | 4618676 - 4619089 | 15494.0 |
| type vi secretion system baseplate subunit tssf | C9Z30_22980 | Not Available | Positive | 4619093 - 4620943 | 71190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





