Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1274467 bp
Thymine Count
1275855 bp
Guanine Count
1301432 bp
Cytosine Count
1296278 bp
Genome Length
5159557 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee atpase escn | C9Z30_20875 | Not Available | Negative | 4227676 - 4229016 | 48833.3 |
| type iii secretion system lee export apparatus protein escv | C9Z30_20880 | Not Available | Negative | 4229000 - 4231027 | 75189.8 |
| type iii secretion system lee chaperone cesl | C9Z30_20885 | Not Available | Negative | 4231024 - 4231377 | 13898.8 |
| type iii secretion system protein sepz | C9Z30_20890 | Not Available | Positive | 4231562 - 4231858 | 9392.5 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9Z30_20895 | Not Available | Positive | 4231939 - 4232316 | 13280.8 |
| type iii secretion system lee inner membrane ring protein escj | C9Z30_20900 | Not Available | Positive | 4232319 - 4232891 | 20758.1 |
| type iii secretion system lee switch protein sepd | C9Z30_20905 | Not Available | Positive | 4232897 - 4233352 | 17550.0 |
| type iii secretion system lee outer membrane ring protein escc | C9Z30_20910 | Not Available | Positive | 4233352 - 4234890 | 56228.9 |
| type iii secretion system lee chaperone cesd | C9Z30_20915 | Not Available | Positive | 4234904 - 4235359 | 17503.7 |
| type iii secretion system lee transcriptional regulator grla | C9Z30_20920 | Not Available | Negative | 4235743 - 4236156 | 16053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





