Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1274467 bp
Thymine Count
1275855 bp
Guanine Count
1301432 bp
Cytosine Count
1296278 bp
Genome Length
5159557 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee inner membrane ring protein escd | C9Z30_20825 | Not Available | Positive | 4217140 - 4218360 | 45222.8 |
| intimin type alpha | C9Z30_20830 | Not Available | Negative | 4218574 - 4221390 | 102542.0 |
| type iii secretion system lee chaperone cest | C9Z30_20835 | Not Available | Negative | 4221450 - 4221920 | 17707.9 |
| type iii secretion system lee translocated intimin receptor tir | C9Z30_20840 | Not Available | Negative | 4222052 - 4223701 | 56371.0 |
| t3ss effector protein map | C9Z30_20845 | Not Available | Negative | 4224019 - 4224630 | 22662.1 |
| tir chaperone family protein | C9Z30_20850 | Not Available | Positive | 4224904 - 4225266 | 14070.9 |
| t3ss effector protein esph | C9Z30_20855 | Not Available | Negative | 4225467 - 4225976 | 19200.7 |
| type iii secretion system protein sepq | C9Z30_20860 | Not Available | Negative | 4226007 - 4226924 | 34938.7 |
| type iii secretion system lee needle length regulator escp | C9Z30_20865 | Not Available | Negative | 4226887 - 4227303 | 16548.9 |
| type iii secretion protein | C9Z30_20870 | Not Available | Negative | 4227296 - 4227616 | 12363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





