Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1274467 bp
Thymine Count
1275855 bp
Guanine Count
1301432 bp
Cytosine Count
1296278 bp
Genome Length
5159557 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
411 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | C9Z30_09145 | Not Available | Negative | 1872539 - 1873789 | 45786.4 |
| 23s rrna pseudouridine synthase e | C9Z30_09150 | Not Available | Positive | 1873961 - 1874614 | 24881.8 |
| nudix hydrolase | C9Z30_09155 | Not Available | Positive | 1874624 - 1875085 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | C9Z30_09160 | Not Available | Positive | 1875139 - 1876245 | 40961.7 |
| lysogenization regulator hfld | C9Z30_09165 | Not Available | Positive | 1876281 - 1876922 | 22949.0 |
| adenylosuccinate lyase | C9Z30_09170 | Not Available | Positive | 1876926 - 1878296 | 51572.7 |
| cupin domain-containing protein | C9Z30_09280 | Not Available | Positive | 1891759 - 1892880 | 42581.2 |
| peptidase t | C9Z30_09285 | Not Available | Negative | 1892929 - 1894155 | 44911.0 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C9Z30_09290 | Not Available | Positive | 1894405 - 1895541 | 43044.8 |
| spermidine/putrescine abc transporter permease potb | C9Z30_09295 | Not Available | Positive | 1895525 - 1896382 | 32196.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





