Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C9Z06_16080 | Not Available | Positive | 3353504 - 3354064 | 20777.2 |
| Hypothetical protein | C9Z06_16085 | Not Available | Positive | 3354073 - 3354243 | 6393.55 |
| Tail sheath protein | C9Z06_16090 | Not Available | Positive | 3354227 - 3355723 | 53182.8 |
| Hypothetical protein | C9Z06_16095 | Not Available | Positive | 3355723 - 3356079 | 12918.1 |
| Putative bacteriophage protein | C9Z06_16100 | Not Available | Positive | 3356079 - 3356348 | 9930.98 |
| hypothetical protein | C9Z06_16105 | Not Available | Positive | 3356315 - 3356503 | 7192.65 |
| Tail protein | C9Z06_16110 | Not Available | Positive | 3356490 - 3358325 | 65291.1 |
| Tail/dna circulation protein | C9Z06_16115 | Not Available | Positive | 3358386 - 3359714 | 47897.5 |
| Tail protein | C9Z06_16120 | Not Available | Positive | 3359711 - 3360790 | 39141.0 |
| Tail protein | C9Z06_16125 | Not Available | Positive | 3360790 - 3361338 | 19598.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





