Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | C9Z06_24585 | Not Available | Negative | 4941360 - 4941509 | 5890.8 |
| thermonuclease | C9Z06_24590 | Not Available | Negative | 4941510 - 4941881 | 14103.2 |
| dna-binding protein | C9Z06_24595 | Not Available | Positive | 4942040 - 4942587 | 21197.8 |
| conjugal transfer protein | C9Z06_24600 | Not Available | Negative | 4942620 - 4944839 | 84309.3 |
| mobilization protein | C9Z06_24605 | Not Available | Positive | 4945018 - 4945293 | 10481.0 |
| hypothetical protein | C9Z06_24610 | Not Available | Positive | 4945314 - 4945538 | 8337.24 |
| plasmid replication protein | C9Z06_24615 | Not Available | Negative | 4945509 - 4946402 | 33663.3 |
| hypothetical protein | C9Z06_24620 | Not Available | Negative | 4946633 - 4946842 | 7839.49 |
| colicin lysis protein | C9Z06_24625 | Not Available | Negative | 4946932 - 4947075 | 4860.07 |
| bacteriocin immunity protein | C9Z06_24630 | Not Available | Negative | 4947137 - 4947397 | 9995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





