Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esct/ysct/hrct family type iii secretion system export apparatus protein | C9Z06_00890 | Not Available | Negative | 177183 - 177950 | 28201.9 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C9Z06_00895 | Not Available | Negative | 177952 - 178212 | 9430.85 |
| yscq/hrcq family type iii secretion apparatus protein | C9Z06_00905 | Not Available | Negative | 178877 - 179449 | 21965.1 |
| hypothetical protein | C9Z06_00910 | Not Available | Negative | 179459 - 179824 | 13693.6 |
| hypothetical protein | C9Z06_00915 | Not Available | Negative | 179956 - 181566 | 60429.6 |
| Trna-gly | Not Available | Not Available | Positive | 181800 - 181873 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | C9Z06_00925 | Not Available | Negative | 181952 - 182707 | 26616.1 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C9Z06_00930 | Not Available | Positive | 183122 - 185419 | 82675.1 |
| xanthine dehydrogenase fad-binding subunit xdhb | C9Z06_00935 | Not Available | Positive | 185430 - 186308 | 31558.6 |
| xanthine dehydrogenase iron-sulfur-binding subunit | C9Z06_00940 | Not Available | Positive | 186305 - 186784 | 16922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





