Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| log family protein ygdh | C9Z06_00515 | Not Available | Positive | 102450 - 103814 | 50975.0 |
| serine transporter | C9Z06_00520 | Not Available | Positive | 104371 - 105660 | 46909.2 |
| l-serine ammonia-lyase | C9Z06_00525 | Not Available | Positive | 105718 - 107085 | 48724.8 |
| flap endonuclease xni | C9Z06_00530 | Not Available | Positive | 107197 - 107952 | 28167.7 |
| lactaldehyde reductase | C9Z06_00535 | Not Available | Negative | 108007 - 109155 | 40515.7 |
| l-fuculose-phosphate aldolase | C9Z06_00540 | Not Available | Negative | 109183 - 109830 | 23791.7 |
| l-fucose-proton symporter | C9Z06_00545 | Not Available | Positive | 110377 - 111693 | 47547.6 |
| l-fucose isomerase | C9Z06_00550 | Not Available | Positive | 111726 - 113501 | 65010.3 |
| l-fuculokinase | C9Z06_00555 | Not Available | Positive | 113610 - 115028 | 52219.6 |
| l-fucose mutarotase | C9Z06_00560 | Not Available | Positive | 115030 - 115452 | 15474.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





