Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | C9Z06_00420 | Not Available | Positive | 80810 - 81412 | 22615.8 |
| ygcg family protein | C9Z06_00425 | Not Available | Positive | 81426 - 82331 | 32480.8 |
| hypothetical protein | C9Z06_00430 | Not Available | Positive | 82367 - 82729 | 13812.1 |
| phosphopyruvate hydratase | C9Z06_00435 | Not Available | Negative | 82785 - 84083 | 45657.6 |
| ctp synthase (glutamine hydrolyzing) | C9Z06_00440 | Not Available | Negative | 84171 - 85808 | 60377.7 |
| nucleoside triphosphate pyrophosphohydrolase | C9Z06_00445 | Not Available | Negative | 86036 - 86827 | 30414.0 |
| endoribonuclease mazf | C9Z06_00450 | Not Available | Negative | 86898 - 87233 | 12158.8 |
| mazf-maze toxin-antitoxin system antitoxin maze | C9Z06_00455 | Not Available | Negative | 87233 - 87481 | 9356.24 |
| gtp pyrophosphokinase | C9Z06_00460 | Not Available | Negative | 87559 - 89793 | 83880.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | C9Z06_00465 | Not Available | Negative | 89841 - 91142 | 48049.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





