Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | C9Z06_00265 | Not Available | Negative | 50255 - 50848 | 21424.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 50848 - 50973 | Not Available |
| transcriptional regulator hosa | C9Z06_00270 | Not Available | Positive | 50995 - 51402 | 15493.9 |
| rna polymerase sigma factor rpos | C9Z06_00275 | Not Available | Negative | 51523 - 52515 | 37975.1 |
| murein hydrolase activator nlpd | C9Z06_00280 | Not Available | Negative | 52578 - 53717 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | C9Z06_00285 | Not Available | Negative | 53857 - 54483 | 23259.2 |
| 5'/3'-nucleotidase sure | C9Z06_00290 | Not Available | Negative | 54477 - 55238 | 26902.0 |
| trna pseudouridine(13) synthase trud | C9Z06_00295 | Not Available | Negative | 55219 - 56268 | 39093.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C9Z06_00300 | Not Available | Negative | 56265 - 56744 | 16898.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | C9Z06_00305 | Not Available | Negative | 56744 - 57454 | 25738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





