Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | C9Z06_22390 | Not Available | Negative | 4622110 - 4623207 | 40291.4 |
| Putative holin | C9Z06_22395 | Not Available | Positive | 4623796 - 4624011 | 7838.59 |
| Lysozyme | C9Z06_22400 | Not Available | Positive | 4624011 - 4624508 | 17972.8 |
| Rz1 protein | C9Z06_22405 | Not Available | Positive | 4624725 - 4624907 | 6690.59 |
| Putative lipoprotein bor | C9Z06_22410 | Not Available | Negative | 4624998 - 4625291 | 10447.9 |
| Putative envelope protein | C9Z06_22415 | Not Available | Negative | 4625582 - 4625992 | 16414.6 |
| Hypothetical protein | C9Z06_22420 | Not Available | Positive | 4626278 - 4626484 | 7624.14 |
| Hypothetical protein | C9Z06_22425 | Not Available | Negative | 4626649 - 4626843 | 7520.93 |
| hypothetical protein | C9Z06_22430 | Not Available | Negative | 4626859 - 4627116 | 9753.66 |
| Dna packaging protein | C9Z06_22435 | Not Available | Positive | 4627232 - 4627777 | 20472.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





