Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | C9Z06_22260 | Not Available | Positive | 4595602 - 4598163 | 92242.5 |
| Tail component | C9Z06_22265 | Not Available | Positive | 4598160 - 4598489 | 12531.0 |
| Tail component | C9Z06_22270 | Not Available | Positive | 4598489 - 4599187 | 25711.0 |
| Tail fiber component | C9Z06_22275 | Not Available | Positive | 4599193 - 4599936 | 28274.3 |
| Tail component | C9Z06_22280 | Not Available | Positive | 4599873 - 4600505 | 21830.5 |
| Host specificity protein | C9Z06_22285 | Not Available | Positive | 4600566 - 4603979 | 124262.0 |
| Putative lom-like outer membrane protein | C9Z06_22290 | Not Available | Positive | 4604050 - 4604649 | 21700.0 |
| Side tail fiber protein | C9Z06_22295 | Not Available | Positive | 4604714 - 4605251 | 18432.2 |
| Hypothetical protein | C9Z06_22380 | Not Available | Positive | 4620614 - 4621519 | 34019.6 |
| Antitermination protein q | C9Z06_22385 | Not Available | Positive | 4621537 - 4621920 | 14173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





