Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 3668958 - 3668972 | Not Available |
| Phage holin | C9Z06_17675 | Not Available | Positive | 3669278 - 3669506 | 8055.22 |
| Holin protein | C9Z06_21470 | Not Available | Positive | 4449577 - 4449713 | 4968.07 |
| Hypothetical protein | C9Z06_21475 | Not Available | Positive | 4449717 - 4450385 | 25474.3 |
| Hypothetical protein | C9Z06_21480 | Not Available | Negative | 4450365 - 4450685 | 12362.0 |
| Lysozyme | C9Z06_21485 | Not Available | Positive | 4450811 - 4451344 | 19523.5 |
| hypothetical protein | C9Z06_21490 | Not Available | Positive | 4451501 - 4451683 | 6598.48 |
| Outer membrane lytic protein rz | C9Z06_21495 | Not Available | Positive | 4451832 - 4452299 | 16929.3 |
| Regulatory protein | C9Z06_21500 | Not Available | Positive | 4452480 - 4453025 | 20554.3 |
| Hypothetical protein | C9Z06_21505 | Not Available | Positive | 4453053 - 4453253 | 7086.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





