Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylcyclotransferase ytfp | C9Z06_03975 | Not Available | Negative | 792329 - 792670 | 12867.2 |
| autotransporter assembly complex protein tamb | C9Z06_03980 | Not Available | Negative | 792673 - 796452 | 136831.0 |
| autotransporter assembly complex protein tama | C9Z06_03985 | Not Available | Negative | 796449 - 798182 | 64783.7 |
| peptide-methionine (s)-s-oxide reductase msra | C9Z06_03990 | Not Available | Positive | 798388 - 799026 | 23335.3 |
| hlyc/corc family transporter | C9Z06_03995 | Not Available | Positive | 799349 - 800692 | 49811.7 |
| duf1107 domain-containing protein | C9Z06_04000 | Not Available | Negative | 800754 - 800960 | 8072.24 |
| ytfj family protein | C9Z06_04005 | Not Available | Positive | 801285 - 801842 | 20617.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9Z06_04010 | Not Available | Negative | 801832 - 802572 | 27163.3 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | C9Z06_04015 | Not Available | Positive | 802762 - 804705 | 70896.0 |
| transcriptional regulator | C9Z06_04020 | Not Available | Negative | 804823 - 805203 | 14076.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





