Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter permease lptg | C9Z06_03775 | Not Available | Negative | 752015 - 753097 | 39621.0 |
| lipopolysaccharide abc transporter permease lptf | C9Z06_03780 | Not Available | Negative | 753097 - 754197 | 40360.1 |
| cytosol aminopeptidase | C9Z06_03785 | Not Available | Positive | 754464 - 755975 | 54883.1 |
| dna polymerase iii subunit chi | C9Z06_03790 | Not Available | Positive | 756070 - 756552 | 18119.3 |
| valine--trna ligase | C9Z06_03795 | Not Available | Positive | 756552 - 759407 | 108170.0 |
| duf898 domain-containing protein | C9Z06_03800 | Not Available | Negative | 759463 - 760659 | 44901.2 |
| gnat family n-acetyltransferase | C9Z06_03805 | Not Available | Positive | 760852 - 761355 | 18609.4 |
| regulator of ribonuclease activity b | C9Z06_03810 | Not Available | Negative | 761401 - 761817 | 15603.5 |
| ornithine carbamoyltransferase | C9Z06_03815 | Not Available | Positive | 761979 - 762983 | 36865.1 |
| hypothetical protein | C9Z06_03820 | Not Available | Negative | 763084 - 763314 | 9336.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





