Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoaspartyl dipeptidase | C9Z06_03560 | Not Available | Positive | 702870 - 704042 | 41073.3 |
| transcriptional regulator | C9Z06_03565 | Not Available | Positive | 704107 - 705018 | 34712.7 |
| anti-adapter protein irad | C9Z06_03570 | Not Available | Negative | 705011 - 705403 | 14764.7 |
| irad leader peptide | C9Z06_03575 | Not Available | Negative | 705400 - 705483 | 3016.48 |
| duf2686 family protein | C9Z06_03580 | Not Available | Positive | 706076 - 706906 | 30713.8 |
| uxu operon transcriptional regulator | C9Z06_03585 | Not Available | Negative | 707047 - 707820 | 29291.8 |
| fructuronate reductase | C9Z06_03590 | Not Available | Negative | 708035 - 709495 | 53631.3 |
| mannonate dehydratase | C9Z06_03595 | Not Available | Negative | 709576 - 710760 | 44796.5 |
| gluconate transporter gntp | C9Z06_03600 | Not Available | Positive | 711100 - 712443 | 47113.9 |
| fimbrial protein | C9Z06_03605 | Not Available | Negative | 712686 - 713588 | 31447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





