Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | C9Z06_03410 | Not Available | Negative | 670735 - 672399 | 59855.9 |
| homoprotocatechuate degradative operon repressor | C9Z06_03415 | Not Available | Negative | 672518 - 672964 | 17255.8 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | C9Z06_03420 | Not Available | Positive | 673236 - 674525 | 47012.8 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | C9Z06_03425 | Not Available | Positive | 674522 - 675988 | 53030.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C9Z06_03430 | Not Available | Positive | 675990 - 676841 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | C9Z06_03435 | Not Available | Positive | 676851 - 677231 | 14295.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | C9Z06_03440 | Not Available | Positive | 677342 - 678145 | 29716.5 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | C9Z06_03445 | Not Available | Positive | 678156 - 678944 | 28074.8 |
| 4-hydroxyphenylacetate permease | C9Z06_03450 | Not Available | Positive | 679119 - 680495 | 50571.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | C9Z06_03455 | Not Available | Positive | 680505 - 681395 | 34355.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





