Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic diguanylate phosphodiesterase | C9Z06_03050 | Not Available | Negative | 596823 - 598421 | 59715.0 |
| l-serine ammonia-lyase | C9Z06_03055 | Not Available | Negative | 598552 - 599916 | 48856.4 |
| coa pyrophosphatase | C9Z06_03060 | Not Available | Negative | 600100 - 600678 | 21464.9 |
| aminodeoxychorismate synthase component 1 | C9Z06_03065 | Not Available | Negative | 600682 - 602043 | 51016.3 |
| yoah family protein | C9Z06_03070 | Not Available | Positive | 602117 - 602296 | 6554.7 |
| duf1889 family protein | C9Z06_03075 | Not Available | Negative | 602416 - 602775 | 13232.0 |
| rida family protein | C9Z06_03080 | Not Available | Negative | 603138 - 603482 | 12493.9 |
| atp-dependent dna helicase | C9Z06_03085 | Not Available | Positive | 603614 - 605524 | 70365.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | C9Z06_03090 | Not Available | Positive | 605582 - 606277 | 25267.3 |
| slp family lipoprotein yeay | C9Z06_03095 | Not Available | Positive | 606317 - 606898 | 20954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





