Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqib family protein | C9Z06_02950 | Not Available | Negative | 576706 - 579339 | 94932.0 |
| paraquat-inducible membrane protein a | C9Z06_02955 | Not Available | Negative | 579308 - 580591 | 48276.3 |
| gaf domain-containing protein | C9Z06_02960 | Not Available | Positive | 580721 - 581218 | 18080.5 |
| rna chaperone proq | C9Z06_02965 | Not Available | Positive | 581315 - 582013 | 25863.9 |
| carboxy terminal-processing peptidase | C9Z06_02970 | Not Available | Positive | 582033 - 584081 | 76551.2 |
| protease htpx | C9Z06_02975 | Not Available | Positive | 584273 - 585154 | 31959.3 |
| mfs transporter | C9Z06_02980 | Not Available | Negative | 585200 - 586573 | 48184.8 |
| dna-binding transcriptional regulator kdgr | C9Z06_02985 | Not Available | Positive | 586750 - 587541 | 29988.1 |
| hypothetical protein | C9Z06_02990 | Not Available | Negative | 587684 - 587923 | 8514.67 |
| phop/phoq regulator mgrb | C9Z06_02995 | Not Available | Positive | 588082 - 588225 | 5552.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





