Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | C9Z06_02795 | Not Available | Positive | 548699 - 549439 | 26438.1 |
| crossover junction endodeoxyribonuclease ruvc | C9Z06_02800 | Not Available | Positive | 549474 - 549995 | 18747.9 |
| yebb family permuted papain-like enzyme | C9Z06_02805 | Not Available | Negative | 549997 - 550599 | 22676.2 |
| hypothetical protein | C9Z06_02810 | Not Available | Positive | 550670 - 550735 | 2699.43 |
| holliday junction branch migration protein ruva | C9Z06_02815 | Not Available | Positive | 550874 - 551485 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | C9Z06_02820 | Not Available | Positive | 551494 - 552504 | 37176.0 |
| zinc abc transporter permease subunit znub | C9Z06_02825 | Not Available | Negative | 552651 - 553436 | 27762.5 |
| mn2+/zn2+abc transporter atp-binding protein | C9Z06_02830 | Not Available | Negative | 553433 - 554188 | 27869.3 |
| zinc abc transporter substrate-binding protein znua | C9Z06_02835 | Not Available | Positive | 554267 - 555199 | 33851.3 |
| murein dd-endopeptidase mepm | C9Z06_02840 | Not Available | Positive | 555215 - 556537 | 49060.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





