Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export chaperone flis | C9Z06_02495 | Not Available | Negative | 492230 - 492640 | 14995.0 |
| flagellar filament capping protein flid | C9Z06_02500 | Not Available | Negative | 492655 - 494067 | 50406.0 |
| flagellin flic | C9Z06_02505 | Not Available | Positive | 494322 - 495797 | 51505.6 |
| rna polymerase sigma factor flia | C9Z06_02510 | Not Available | Positive | 495962 - 496681 | 27522.8 |
| flagella biosynthesis regulatory protein fliz | C9Z06_02515 | Not Available | Positive | 496727 - 497278 | 21572.0 |
| cystine abc transporter substrate-binding protein | C9Z06_02520 | Not Available | Positive | 497366 - 498166 | 28996.8 |
| d-cysteine desulfhydrase | C9Z06_02525 | Not Available | Positive | 498271 - 499257 | 35155.4 |
| amino acid abc transporter permease | C9Z06_02530 | Not Available | Positive | 499272 - 499940 | 24802.7 |
| l-cystine abc transporter atp-binding protein yecc | C9Z06_02535 | Not Available | Positive | 499937 - 500689 | 27707.8 |
| transcriptional regulator sdia | C9Z06_02540 | Not Available | Positive | 500919 - 501641 | 28063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





