Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | C9Z06_02230 | Not Available | Negative | 442308 - 443024 | 25868.5 |
| amp nucleosidase | C9Z06_02235 | Not Available | Negative | 443367 - 444821 | 53997.9 |
| shikimate transporter | C9Z06_02240 | Not Available | Negative | 444923 - 446239 | 47803.2 |
| lipopolysaccharide heptosyltransferase family protein | C9Z06_02245 | Not Available | Positive | 446554 - 447606 | 39481.4 |
| Trna-asn | Not Available | Not Available | Positive | 455258 - 455333 | Not Available |
| protein mtfa | C9Z06_02260 | Not Available | Negative | 455434 - 456231 | 30329.8 |
| Trna-ser | Not Available | Not Available | Positive | 456325 - 456414 | Not Available |
| cytochrome b | C9Z06_02270 | Not Available | Negative | 456984 - 457514 | 20338.4 |
| metal-binding protein zint | C9Z06_02275 | Not Available | Negative | 457857 - 458528 | 25553.0 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | C9Z06_02280 | Not Available | Negative | 458764 - 459399 | 24053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





