Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | C9Z06_01925 | Not Available | Positive | 390132 - 391310 | 44804.5 |
| udp-glucose 4-epimerase gale | C9Z06_01930 | Not Available | Positive | 391345 - 392358 | 37863.7 |
| nadp-dependent phosphogluconate dehydrogenase | C9Z06_01935 | Not Available | Positive | 392418 - 393824 | 51470.1 |
| udp-glucose 6-dehydrogenase | C9Z06_01940 | Not Available | Positive | 394073 - 395239 | 43423.9 |
| nad-dependent epimerase | C9Z06_01945 | Not Available | Negative | 395305 - 396309 | 37656.9 |
| lps o-antigen chain length determinant protein wzzb | C9Z06_01955 | Not Available | Positive | 396735 - 397712 | 36262.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | C9Z06_01960 | Not Available | Negative | 397808 - 398419 | 22842.2 |
| imidazole glycerol phosphate synthase subunit hisf | C9Z06_01965 | Not Available | Negative | 398413 - 399189 | 28470.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | C9Z06_01970 | Not Available | Negative | 399171 - 399908 | 26046.2 |
| imidazole glycerol phosphate synthase subunit hish | C9Z06_01975 | Not Available | Negative | 399908 - 400498 | 21654.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





