Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln family type ivb pilus formation outer membrane protein | C9Z06_23955 | Not Available | Positive | 4835168 - 4836787 | 57485.6 |
| pilus assembly protein | C9Z06_23960 | Not Available | Positive | 4836808 - 4838103 | 47715.5 |
| type iv pilus biogenesis protein pilp | C9Z06_23965 | Not Available | Positive | 4838093 - 4838545 | 16301.5 |
| type ii secretion protein e | C9Z06_23970 | Not Available | Positive | 4838630 - 4840138 | 56042.2 |
| type ii secretion protein f | C9Z06_23975 | Not Available | Positive | 4840140 - 4841240 | 40987.3 |
| prepilin-type cleavage/methylation domain-containing protein | C9Z06_23980 | Not Available | Positive | 4841314 - 4841850 | 19352.3 |
| lytic transglycosylase | C9Z06_23985 | Not Available | Positive | 4841904 - 4842377 | 17765.6 |
| prepilin peptidase | C9Z06_23990 | Not Available | Positive | 4842396 - 4843031 | 23068.3 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C9Z06_23995 | Not Available | Positive | 4843036 - 4844400 | 48969.5 |
| hypothetical protein | C9Z06_24010 | Not Available | Positive | 4844858 - 4845148 | 10840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





