Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Z06_23325 | Not Available | Negative | 4746240 - 4746755 | 18943.8 |
| duf1983 domain-containing protein | C9Z06_23330 | Not Available | Negative | 4746930 - 4748908 | 71882.2 |
| holin | C9Z06_23335 | Not Available | Positive | 4748909 - 4749045 | 4968.07 |
| duf1327 domain-containing protein | C9Z06_23340 | Not Available | Positive | 4749049 - 4749840 | 29680.3 |
| hypothetical protein | C9Z06_23345 | Not Available | Positive | 4749929 - 4750216 | 10636.7 |
| lysozyme | C9Z06_23350 | Not Available | Positive | 4750351 - 4750711 | 12940.8 |
| tail assembly protein | C9Z06_23355 | Not Available | Negative | 4750712 - 4751124 | 14320.5 |
| phage tail protein | C9Z06_23360 | Not Available | Negative | 4751070 - 4751813 | 28272.4 |
| phage minor tail protein l | C9Z06_23365 | Not Available | Negative | 4751824 - 4752502 | 24905.4 |
| alpa family phage regulatory protein | C9Z06_23370 | Not Available | Positive | 4752503 - 4752585 | 2870.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





