Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | C9Z06_22760 | Not Available | Positive | 4675257 - 4676178 | 32466.9 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | C9Z06_22765 | Not Available | Positive | 4676182 - 4677540 | 49363.9 |
| tryptophan synthase subunit beta | C9Z06_22770 | Not Available | Positive | 4677552 - 4678745 | 42967.6 |
| tryptophan synthase subunit alpha | C9Z06_22775 | Not Available | Positive | 4678745 - 4679551 | 28739.8 |
| hypothetical protein | C9Z06_22780 | Not Available | Positive | 4679932 - 4680111 | 6002.69 |
| ycie/ycif family protein | C9Z06_22785 | Not Available | Positive | 4680197 - 4680697 | 18598.2 |
| ferritin-like domain-containing protein | C9Z06_22790 | Not Available | Positive | 4680743 - 4681249 | 18997.6 |
| ykgj family cysteine cluster protein | C9Z06_22810 | Not Available | Negative | 4682851 - 4683180 | 11867.1 |
| spermidine/putrescine abc transporter permease potb | C9Z06_22815 | Not Available | Negative | 4683346 - 4684209 | 32384.4 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C9Z06_22820 | Not Available | Negative | 4684193 - 4685329 | 43044.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





