Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | C9Z06_22320 | Not Available | Negative | 4610408 - 4611658 | 45772.4 |
| 23s rrna pseudouridine synthase e | C9Z06_22325 | Not Available | Positive | 4611830 - 4612483 | 24881.8 |
| nudix hydrolase | C9Z06_22330 | Not Available | Positive | 4612493 - 4612954 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | C9Z06_22335 | Not Available | Positive | 4613008 - 4614114 | 40961.7 |
| lysogenization regulator hfld | C9Z06_22340 | Not Available | Positive | 4614150 - 4614791 | 22949.0 |
| adenylosuccinate lyase | C9Z06_22345 | Not Available | Positive | 4614795 - 4616165 | 51572.7 |
| two-component system response regulator phop | C9Z06_22350 | Not Available | Positive | 4616333 - 4617004 | 25536.7 |
| sensor protein phoq | C9Z06_22355 | Not Available | Positive | 4617004 - 4618464 | 55302.8 |
| hypothetical protein | C9Z06_22360 | Not Available | Positive | 4618916 - 4619104 | 7112.67 |
| hypothetical protein | C9Z06_22365 | Not Available | Negative | 4619314 - 4619595 | 11144.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





