Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | C9Z06_21790 | Not Available | Negative | 4502688 - 4506122 | 130915.0 |
| type vi secretion system protein tssa | C9Z06_21795 | Not Available | Negative | 4506231 - 4507643 | 52362.2 |
| type vi secretion system-associated protein tago | C9Z06_21800 | Not Available | Negative | 4507648 - 4508202 | 19936.9 |
| aaa family atpase | C9Z06_21805 | Not Available | Negative | 4508203 - 4509987 | 65205.0 |
| dotu family type iv/vi secretion system protein | C9Z06_21810 | Not Available | Negative | 4509996 - 4510757 | 29415.8 |
| type vi secretion system baseplate subunit tssk | C9Z06_21815 | Not Available | Negative | 4510762 - 4512093 | 49981.9 |
| type vi secretion system lipoprotein tssj | C9Z06_21820 | Not Available | Negative | 4512096 - 4512620 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | C9Z06_21825 | Not Available | Negative | 4512617 - 4513897 | 47437.9 |
| type vi secretion system baseplate subunit tssg | C9Z06_21830 | Not Available | Negative | 4513922 - 4515004 | 40262.1 |
| type vi secretion system baseplate subunit tssf | C9Z06_21835 | Not Available | Negative | 4514968 - 4516818 | 71190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





