Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module antidote protein, higa family | C9Z06_21440 | Not Available | Positive | 4443321 - 4443662 | 13141.8 |
| copper-exporting p-type atpase copa | C9Z06_21445 | Not Available | Negative | 4443776 - 4446280 | 87956.6 |
| glutaminase | C9Z06_21450 | Not Available | Positive | 4446542 - 4447474 | 32933.3 |
| amino acid permease | C9Z06_21455 | Not Available | Positive | 4447477 - 4448769 | 45661.5 |
| transcriptional regulator | C9Z06_21460 | Not Available | Positive | 4448894 - 4449301 | 15236.0 |
| nfed family protein | C9Z06_21465 | Not Available | Negative | 4449302 - 4449576 | 10162.2 |
| rhs repeat-associated core domain-containing protein | C9Z06_21610 | Not Available | Positive | 4469813 - 4470450 | 23444.7 |
| sel1 repeat family protein | C9Z06_21615 | Not Available | Positive | 4470462 - 4470923 | 18000.5 |
| type iv secretion protein rhs | C9Z06_21620 | Not Available | Positive | 4471144 - 4471263 | 4316.13 |
| type iv secretion protein rhs | C9Z06_21625 | Not Available | Positive | 4471248 - 4471541 | 10737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





