Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1428 domain-containing protein | C9Z06_21330 | Not Available | Negative | 4422280 - 4422633 | 13318.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | C9Z06_21340 | Not Available | Positive | 4422934 - 4423323 | 14450.4 |
| hypothetical protein | C9Z06_21345 | Not Available | Negative | 4423354 - 4423926 | 19442.3 |
| acyl-coa thioesterase ii | C9Z06_21350 | Not Available | Positive | 4424144 - 4425004 | 31968.1 |
| ammonia channel | C9Z06_21355 | Not Available | Negative | 4425052 - 4426338 | 44517.4 |
| nitrogen regulatory protein p-ii 2 | C9Z06_21360 | Not Available | Negative | 4426368 - 4426706 | 12259.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | C9Z06_21365 | Not Available | Negative | 4426887 - 4428528 | 60062.0 |
| dna polymerase iii subunit gamma/tau | C9Z06_21370 | Not Available | Positive | 4428529 - 4429176 | 24001.6 |
| ybab/ebfc family nucleoid-associated protein | C9Z06_21375 | Not Available | Positive | 4429229 - 4429558 | 12015.6 |
| recombination protein recr | C9Z06_21380 | Not Available | Positive | 4429558 - 4430163 | 21964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





