Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | C9Z06_20920 | Not Available | Positive | 4332986 - 4335136 | 81426.8 |
| dna-binding protein ybib | C9Z06_20925 | Not Available | Positive | 4335164 - 4336126 | 35031.6 |
| malate/lactate/ureidoglycolate dehydrogenase | C9Z06_20930 | Not Available | Positive | 4336267 - 4337352 | 38875.2 |
| duf1471 domain-containing protein | C9Z06_20935 | Not Available | Negative | 4337580 - 4337840 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | C9Z06_20940 | Not Available | Negative | 4338105 - 4338371 | 9772.33 |
| fe2+-dependent dioxygenase | C9Z06_20945 | Not Available | Negative | 4338445 - 4339122 | 25530.2 |
| catecholate siderophore receptor fiu | C9Z06_20950 | Not Available | Negative | 4339164 - 4341446 | 81974.5 |
| duf1471 domain-containing protein | C9Z06_20955 | Not Available | Negative | 4341710 - 4341970 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C9Z06_20960 | Not Available | Positive | 4342165 - 4343172 | 37305.6 |
| mechanosensitive channel protein | C9Z06_20965 | Not Available | Negative | 4343169 - 4345391 | 81765.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





