Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | C9Z06_20720 | Not Available | Positive | 4311183 - 4312130 | 34170.4 |
| 16s rrna m5c967 methyltransferase | C9Z06_20725 | Not Available | Positive | 4312176 - 4313465 | 48322.2 |
| trk system potassium uptake protein trka | C9Z06_20730 | Not Available | Positive | 4313487 - 4314863 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | C9Z06_20735 | Not Available | Positive | 4314993 - 4315403 | 14927.7 |
| alternative ribosome-rescue factor a | C9Z06_20740 | Not Available | Negative | 4315400 - 4315618 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | C9Z06_20745 | Not Available | Negative | 4315674 - 4316099 | 16180.4 |
| duf1992 domain-containing protein | C9Z06_20750 | Not Available | Negative | 4316110 - 4316478 | 13973.6 |
| 50s ribosomal protein l17 | C9Z06_20755 | Not Available | Negative | 4316585 - 4316968 | 14365.4 |
| dna-directed rna polymerase subunit alpha | C9Z06_20760 | Not Available | Negative | 4317009 - 4317998 | 36513.9 |
| 30s ribosomal protein s4 | C9Z06_20765 | Not Available | Negative | 4318024 - 4318644 | 23470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





