Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0055 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1222398 bp
Thymine Count
1219260 bp
Guanine Count
1253701 bp
Cytosine Count
1255407 bp
Genome Length
4959521 bp
Protein-coding Genes
4532 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | C9Z06_20665 | Not Available | Positive | 4302142 - 4303383 | 46681.3 |
| xre family transcriptional regulator | C9Z06_20670 | Not Available | Negative | 4303522 - 4304616 | 42515.0 |
| gamma carbonic anhydrase family protein | C9Z06_20680 | Not Available | Positive | 4306205 - 4306759 | 20246.3 |
| duf1488 domain-containing protein | C9Z06_20685 | Not Available | Negative | 4306735 - 4306992 | 10007.5 |
| shikimate dehydrogenase | C9Z06_20690 | Not Available | Negative | 4306989 - 4307807 | 29465.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C9Z06_20695 | Not Available | Negative | 4307812 - 4308384 | 20641.7 |
| hypothetical protein | C9Z06_20700 | Not Available | Negative | 4308389 - 4308931 | 19845.9 |
| duf494 domain-containing protein | C9Z06_20705 | Not Available | Negative | 4308960 - 4309433 | 18484.2 |
| dna-protecting protein dpra | C9Z06_20710 | Not Available | Negative | 4309405 - 4310529 | 41088.5 |
| peptide deformylase | C9Z06_20715 | Not Available | Positive | 4310659 - 4311168 | 19329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





